The Reproducibility Working Group Bibliography
The Reproducibility Working Group Bibliography
Bibliography
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Heterogenous brain activations across individuals localize to a common network
Shaoling Peng
,
Zaixu Cui
,
Suyu Zhong
,
Yanyang Zhang
,
Alexander L. Cohen
,
Michael D. Fox
,
Gaolang Gong
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DOI
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Towards reproducible neuroimaging: Solutions for sharing and re-using brain imaging data
Camille Maumet
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The past, present, and future of the brain imaging data structure (BIDS)
Abstract The Brain Imaging Data Structure (BIDS) is a community-driven standard for the organization of data and metadata from a …
Russell A. Poldrack
,
Christopher J. Markiewicz
,
Stefan Appelhoff
,
Yoni K. Ashar
,
Tibor Auer
,
Sylvain Baillet
,
Shashank Bansal
,
Leandro Beltrachini
,
Christian G. Benar
,
Giacomo Bertazzoli
,
Suyash Bhogawar
,
Ross W. Blair
,
Marta Bortoletto
,
Mathieu Boudreau
,
Teon L. Brooks
,
Vince D. Calhoun
,
Filippo Maria Castelli
,
Patricia Clement
,
Alexander L. Cohen
,
Julien Cohen-Adad
,
Sasha D’Ambrosio
,
Gilles De Hollander
,
María De La Iglesia-Vayá
,
Alejandro De La Vega
,
Arnaud Delorme
,
Orrin Devinsky
,
Dejan Draschkow
,
Eugene Paul Duff
,
Elizabeth DuPre
,
Eric Earl
,
Oscar Esteban
,
Franklin W. Feingold
,
Guillaume Flandin
,
Anthony Galassi
,
Giuseppe Gallitto
,
Melanie Ganz
,
Rémi Gau
,
James Gholam
,
Satrajit S. Ghosh
,
Alessio Giacomel
,
Ashley G. Gillman
,
Padraig Gleeson
,
Alexandre Gramfort
,
Samuel Guay
,
Giacomo Guidali
,
Yaroslav O. Halchenko
,
Daniel A. Handwerker
,
Nell Hardcastle
,
Peer Herholz
,
Dora Hermes
,
Christopher J. Honey
,
Robert B. Innis
,
Horea-Ioan Ioanas
,
Andrew Jahn
,
Agah Karakuzu
,
David B. Keator
,
Gregory Kiar
,
Balint Kincses
,
Angela R. Laird
,
Jonathan C. Lau
,
Alberto Lazari
,
Jon Haitz Legarreta
,
Adam Li
,
Xiangrui Li
,
Bradley C. Love
,
Hanzhang Lu
,
Eleonora Marcantoni
,
Camille Maumet
,
Giacomo Mazzamuto
,
Steven L. Meisler
,
Mark Mikkelsen
,
Henk Mutsaerts
,
Thomas E. Nichols
,
Aki Nikolaidis
,
Gustav Nilsonne
,
Guiomar Niso
,
Martin Norgaard
,
Thomas W. Okell
,
Robert Oostenveld
,
Eduard Ort
,
Patrick J. Park
,
Mateusz Pawlik
,
Cyril R. Pernet
,
Franco Pestilli
,
Jan Petr
,
Christophe Phillips
,
Jean-Baptiste Poline
,
Luca Pollonini
,
Pradeep Reddy Raamana
,
Petra Ritter
,
Gaia Rizzo
,
Kay A. Robbins
,
Alexander P. Rockhill
,
Christine Rogers
,
Ariel Rokem
,
Chris Rorden
,
Alexandre Routier
,
Jose Manuel Saborit-Torres
,
Taylor Salo
,
Michael Schirner
,
Robert E. Smith
,
Tamas Spisak
,
Julia Sprenger
,
Nicole C. Swann
,
Martin Szinte
,
Sylvain Takerkart
,
Bertrand Thirion
,
Adam G. Thomas
,
Sajjad Torabian
,
Gael Varoquaux
,
Bradley Voytek
,
Julius Welzel
,
Martin Wilson
,
Tal Yarkoni
,
Krzysztof J. Gorgolewski
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DOI
URL
A reproducible and generalizable software workflow for analysis of large-scale neuroimaging data collections using BIDS Apps
Abstract Neuroimaging research faces a crisis of reproducibility. With massive sample sizes and greater data complexity, this problem …
Chenying Zhao
,
Dorota Jarecka
,
Sydney Covitz
,
Yibei Chen
,
Simon B. Eickhoff
,
Damien A. Fair
,
Alexandre R. Franco
,
Yaroslav O. Halchenko
,
Timothy J. Hendrickson
,
Felix Hoffstaedter
,
Audrey Houghton
,
Gregory Kiar
,
Austin Macdonald
,
Kahini Mehta
,
Michael P. Milham
,
Taylor Salo
,
Michael Hanke
,
Satrajit S. Ghosh
,
Matthew Cieslak
,
Theodore D. Satterthwaite
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DOI
URL
Illusory generalizability of clinical prediction models
It is widely hoped that statistical models can improve decision-making related to medical treatments. Because of the cost and scarcity …
Adam M. Chekroud
,
Matt Hawrilenko
,
Hieronimus Loho
,
Julia Bondar
,
Ralitza Gueorguieva
,
Alkomiet Hasan
,
Joseph Kambeitz
,
Philip R. Corlett
,
Nikolaos Koutsouleris
,
Harlan M. Krumholz
,
John H. Krystal
,
Martin Paulus
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DOI
URL
The past, present and future of neuroscience data sharing: a perspective on the state of practices and infrastructure for FAIR
Neuroscience has made significant strides over the past decade in moving from a largely closed science characterized by anemic data …
Maryann E. Martone
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DOI
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Reproducibility in Neuroimaging Analysis: Challenges and Solutions
Recent years have marked a renaissance in efforts to increase research reproducibility in psychology, neuroscience, and related fields. …
Rotem Botvinik-Nezer
,
Tor D. Wager
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DOI
URL
FAIRly big: A framework for computationally reproducible processing of large-scale data
Abstract Large-scale datasets present unique opportunities to perform scientific investigations with unprecedented breadth. However, …
Adina S. Wagner
,
Laura K. Waite
,
Małgorzata Wierzba
,
Felix Hoffstaedter
,
Alexander Q. Waite
,
Benjamin Poldrack
,
Simon B. Eickhoff
,
Michael Hanke
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